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If you set your own binding, for instance --bind-to core, be aware that the number of cores is half of the number of total HT processors. With that said, if you are running your job with half the number of cores as requested then you may get better performance by specifying --bind-to core rather than the default.
If your job does not use the system openmpi, or does not use MPI, then any desired core binding will need to be set up with whatever mechanism the software uses. Otherwise, there will be no core binding. Again, that may not be a major issue. If your job does not work well with HT then run on a number of cores equal to half of the number of slots requested and the OS scheduler will minimize contention.
new SGE utilities
While SoGE is very similar to previous versions of SGE there are some new utilities that people may find of interest. There are manual pages for each of these.
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