Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.
Comment: ARGON-2674

Table of Contents

...

If your job does not use the system openmpi, or does not use MPI, then any desired core binding will need to be set up with whatever mechanism the software uses. Otherwise, there will be no core binding. Again, that may not be a major issue. If your job does not work well with HT then run on a number of cores equal to half of the number of slots requested and the OS scheduler will minimize contention. 

new SGE utilities

While SoGE is very similar to previous versions of SGE there are some new utilities that people may find of interest. There are manual pages for each of these.

...

Table plus
sortColumn1
allowExporttrue
columnTypesS,S,S,I,I


QueueNode DescriptionQueue ManagerSlotsTotal memory (GB)
AML(1) 56-core 256GBAaron Miller56256
ANTH

(4) 56-core 128GB
(2) 32-core 64GB

Andrew Kitchen278640

ARROMA

(8) 56-core 128GBJun Wang4481024
AS(5) 56-core 256GB
(7) 32-core 64GB

Katharine Corum

5041728
BH(1) 56-core 512GBBin He56512

BIGREDQ

(13) 56-core 256GB

Sara Mason

7283328

BIOLOGY

(1) 56-core 256GB

Matthew Brockman

56256

BIOSTAT

(2) 56-core 128GB
(3) 32-core 256GB
Patrick Breheny
Grant Brown
Yuan Huang
Dan Sewell
Brian Smith
2081024
BIO-INSTR(3) 56-core 256GBBrad Carson
Bin He
Jan Fassler
168768
BLAYES(1) 56-core 512GBSanvesh Srivastava56512
CBIG

(1) 56-core 256GB
(1) 64-core 192GB, not yet equipped with accelerators

Mathews Jacob

120

448
CBIG-HM(1) 56-core 512GB with (2) P100 acceleratorsMathews Jacob56512
CCOM(18) 56-core 512GB
5 running jobs per user 

Boyd Knosp

10089216
CCOM-GPU(2) 56-core 512GB with P100 accelerator

Boyd Knosp

1121024

CGRER

(10) 56-core 128GB
(6) 32-core 64GB

Jeremie Moen

7521664
CHEMISTRY(3) 56-core 256GB

Brad Carson

168768

CLAS-INSTR

(2) 56-core 256GB

Brad Carson

112512
CLAS-INSTR-GPU

(2) 40-core 192GB with 1080Ti accelerators

(One node with single, one node with two accelerators)

Brad Carson80384
CLL(5) 56-core 128GB
(10) 32-core 64GB
(1) 32-core 256GB

Mark Wilson
Brian Miller 

6321536
COB(2) 56-core 256GB
(1) 32-core 64GB
Brian Heil144576
COB-GPU(1) 40-core 192GB with (2)Titan V acceleratorsBrian Heil40192

CODBCB

(1) 40-core 384GB with (1)Titan V accelerator

Brad A Amendt

Xian Jin Xie

40384
COE

(10) 56-core 256GB
(11) 32-core 256GB
(10) 32-core 64GB

Note: Users are restricted to no more than three running jobs in the COE queue.

Matt McLaughlin

12326016
COE-GPU

(2) 40-core 192GB with (4) Titan V accelerators

(2) 40-core 192GB with (4) 1080Ti accelerators

Matt McLaughlin160768

DARBROB

(1) 56-core 256GB

Benjamin Darbro

56256
FERBIN(13) 56-core 128GBAdrian Elcock7281664

MF

(6) 56-core 128GB
(1) 32-core 64GB

Michael Flatte

368832
MF-HM(2) 56-core 512GBMichael Flatte1121024

FLUIDSLAB

(8) 56-core 128GB

Mark Wilson
Brian Miller

4481024
AIS(1) 56-core 256GBGrant Brown56256

GEOPHYSICS

(3) 56-core 128GB

William Barnhart

168384
GV(2) 56-core 256GB

Mark Wilson
Brian Miller

112512
HJ(10) 56-core 128GB
(11) 32-core 64-GB
(4) 32-core 256-GB
(1) 24-core 512-GB
Hans Johnson10643520
HJ-GPU(1) 56-core 512GB with P100 acceleratorHans Johnson56512
IFC(10) 56-core 256GB 

Mark Wilson
Brian Miller

5602560
IIHG(10) 56-core 256GB

Diana Kolbe

560256

INFORMATICS

(12) 56-core 256GB
(15) 32-core 256GB
Ben Rogers,
UI3 Faculty
11526912

INFORMATICS-GPU

(2) 56-core 256GB with Titan V accelerators
(2) 40-core 192GB with (3) Titan V accelerators

Ben Rogers192896

INFORMATICS-HM-GPU

(1) 56-core 512GB with (2) P100 acceleratorsBen Rogers56512
IVR(4) 56-core 256GB
(1) 56-core 512GB
(4) 32-core 64GB
(1) 32-core 256GB

Todd Scheetz

4402048
IVR-GPU(1) 56-core 512GB with K80 acceleratorTodd Scheetz561536
IVRVOLTA(4) 56-core 512GB with Titan VMike Schnieders2242048
IWA(11) 56-core 128GB

Mark Wilson
Brian Miller

6161408
JM(3) 56-core 512GB
(2) 32-core 512GB
(2) 24-core 512GB

Jake Michaelson

2803584
JM-GPU(1) 56-core 256GB with P100 acceleratorJake Michaelson56512
JP(2) 56-core 512GB

Virginia Willour

1121024
JS(10) 56-core 256GBJames Shepherd5602560
LUNG(2) 56-core 512GB with P40 acceleratorJoe Reinhardt1121024
MANSCI(1) 56-core 128GB
(1) 32-core 64GB

Qihang Lin

88192
MANSCI-GPU(1) 56-core 512GB with P100 acceleratorQihang Lin56512
MANORG(1) 56-core 128GBMichele Williams/Brian Heil56128

MORL

(5) 56-core 256GB

William (Daniel) Walls

2801280
MS(5) 56-core 256G with (2) P100 GPUs
(7) 40-core 96G with (4) 1080Ti GPUs
(1) 40-core 96G with (4) Titan V GPUS
(20) 32-core 64GB

Mike Schnieders

12403328
NEURO(1) 56-core 256GBMarie Gaine/Ted Abel56256
NOLA(1) 56-core 512GBEd Sander56512
PINC(6) 56-core 256GBJason Evans3361536
REX(4) 56-core 128GB

Mark Wilson
Brian Miller

224512
REX-HM(1) 56-core 512GB

Mark Wilson
Brian Miller

56512
SB(4) 56-core 128GB
(2) 32-core 64GB

Scott Baalrud

288576
STATEPI(1) 56-core 256GBLinnea Polgreen56256
TEMPLIN(1) 56-core 256GBJonathan Templin56256
UDAY(4) 56-core 128GB

Mark Wilson
Brian Miller

224512
UI(20) 56-core 256GB
(66) 32-core 64GB
 32329344

UI-DEVELOP

(1) 56-core 256GB
(1) 56-core 256GB with P100 accelerator
 112512
UI-GPU

(10) 32-core 64GB with (1) K20 accelerator
(5) 56-core 256GB with P100 accelerator
(1) 40-core 192GB with (1) 1080Ti accelerators
(2) 40-core 192GB with (4) 1080Ti accelerators
(4) 40-core 192GB with (4) Titan V accelerators
(1) 40-core 192GB with (2) Titan V accelerators

 8723264
UI-HM(5) 56-core 512GB
(3) 24-core 512GB
 3524096
UI-MPI

(19) 56-core 256GB

 10644864
all.q

(174) 32-core 64GB
(115) 56-core 128GB
(2) 64-core 192GB
(49) 32-core 256GB
(154) 56-core 256GB
(7) 24-core 512GB
(2) 32-core 512GB
(42) 56-core 512GB
(10) 32-core 64GB with (1) K20 accelerator
(1) 32-core 256GB with (1) K20 accelerator
(2) 56-core 512GB with (1) K80 accelerator
(6) 56-core 256GB with (1) P100 accelerator
(5) 56-core 256GB with (2) P100 accelerators
(8) 56-core 512GB with (1) P100 accelerator
(2) 56-core 512GB with (2) P100 accelerators
(2) 56-core 512GB with (1) P40 accelerator
(3) 56-core 256GB with (1) Titan V accelerator
(4) 56-core 512GB with (1) Titan V accelerator
(1) 40-core 96GB with (4) Titan V accelerator
(6) 40-core 192GB with (4) Titan V accelerators
(2) 40-core 192GB with (3) Titan V accelerators
(2) 40-core 192GB with (2) Titan V accelerators
(1) 40-core 192GB with (1) Titan V accelerators
(7) 40-core 96GB with (4) 1080Ti accelerators
(4) 40-core 192GB with (4) 1080Ti accelerators
(1) 40-core 192GB with (2) 1080Ti accelerators
(1) 40-core 192GB with (1) 1080Ti accelerator

 28080114240
NEUROSURGERY(1) 56-core 512GB with K80 accelerator

Haiming Chen

56512
SEMI(1) 56-core 128GB

Craig Pryor

56128
ACB(1) 56-core 256GBAdam Dupuy56256
FFME(16) 56-core 128GBMark Wilson8962048
FFME-HM(1) 56-core 512GBMark Wilson56512
RP(2) 56-core 512GBRobert Philibert1121024
LT

(2) 56-core 512GB with P100 accelerator
(1) 32-core 256GB with K20 accelerator
(1) 24-core 512GB

Luke Tierney1681792
KA(1) 56-core 512GB
(1) 32-core 256GB
Kin Fai Au88768
BA(2) 32-core 64GB

Bruce Ayati

64128
DAWSON(1) 32-core 256GBJeff Dawson32256
FISH(9) 32-core 64GBLarry Weber288576
GW(2) 32-core 256GBGinny Willour64512
JES(1) 56-core 512GBJacob Simmering56512
MP(1) 32-core 256GBMiles Pufall32256
PABLO(6) 32-core 64GB
(1) 32-core 256GB
Pablo Carrica224640
SH(5) 32-core 256GB

Shizhong Han

1601280
SHIP(10) 32-core 64GBFred Stern320640
TB(1) 32-core 64GBTerry Braun3264


...